STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM2BLysine demethylase 2B. (1348 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.999
PCGF1
Polycomb group ring finger 1.
   
 0.981
ENSCSAP00000018574
Ubiquitin-like domain-containing protein.
    
 0.953
RING1
Ring finger protein 1.
   
 0.926
RNF2
Ring finger protein 2.
   
 0.926
BCORL1
BCL6 corepressor like 1.
   
 0.888
RYBP
RING1 and YY1 binding protein.
    
 0.879
CACUL1
CDK2 associated cullin domain 1; Belongs to the cullin family.
    
 0.840
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.840
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.840
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.