STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPD4-hydroxyphenylpyruvate dioxygenase. (393 aa)    
Predicted Functional Partners:
HGD
Homogentisate 1,2-dioxygenase.
  
 0.998
TAT
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
   
 
 0.986
GOT2
Aspartate aminotransferase.
  
 
 0.960
GOT1
Aspartate aminotransferase.
  
 
 0.957
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
  
 
 0.957
MIF
Macrophage migration inhibitory factor.
     
 0.912
IL4I1
Amine oxidase.
     
  0.900
PCCB
Propionyl-CoA carboxylase subunit beta.
  
 
 0.794
MCCC2
Methylcrotonoyl-CoA carboxylase 2.
  
 
 0.794
FAH
Fumarylacetoacetase.
 
  
 0.789
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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