STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBNO1Strawberry notch homolog 1. (1158 aa)    
Predicted Functional Partners:
RIF1
Replication timing regulatory factor 1.
   
  
 0.663
ANKRD17
Ankyrin repeat domain 17.
   
   0.581
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
    0.570
PDS5A
PDS5 cohesin associated factor A.
   
  
 0.543
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
   
    0.537
WAPL
WAPL cohesin release factor.
   
    0.529
BIRC6
Baculoviral IAP repeat containing 6.
   
    0.449
IL22RA2
Interleukin 22 receptor subunit alpha 2.
      
 0.414
RIOK1
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
   
  
 0.406
SOX5
SRY-box transcription factor 5.
      
 0.403
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.