STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM28Tripartite motif containing 28. (834 aa)    
Predicted Functional Partners:
SMARCAD1
Uncharacterized protein.
   
 
 0.936
CBX5
Chromobox 5.
    
 0.926
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
   
 0.893
ZNF10
Uncharacterized protein.
   
 0.869
CBX1
Chromobox 1.
    
 0.861
ZNF350
Zinc finger protein 350.
   
 0.759
DNMT1
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
   
 
 0.734
SMAD4
Mothers against decapentaplegic homolog.
   
 0.727
TRIM24
Tripartite motif containing 24.
    
 
0.723
CHD3
Chromodomain helicase DNA binding protein 3.
   
0.712
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.