Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RAP1ARAP1A, member of RAS oncogene family. (184 aa)    
Predicted Functional Partners:
RAP1B
Uncharacterized protein.
  
 
0.999
APBB1IP
Amyloid beta precursor protein binding family B member 1 interacting protein.
    
 0.995
RAPGEF4
Rap guanine nucleotide exchange factor 4.
   
 0.995
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
    
 0.994
RAP1GAP
RAP1 GTPase activating protein.
    
 0.991
ENSCSAP00000011134
Uncharacterized protein.
    
 0.989
KRIT1
Uncharacterized protein.
    
 0.988
RAPGEF3
Rap guanine nucleotide exchange factor 3.
    
 0.987
RAPGEF1
Rap guanine nucleotide exchange factor 1.
    
 0.986
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.985
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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