STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR47WD repeat domain 47. (919 aa)    
Predicted Functional Partners:
CAMSAP3
Calmodulin regulated spectrin associated protein family member 3.
 
 
 
 0.776
CAMSAP2
Calmodulin regulated spectrin associated protein family member 2.
 
 
 
 0.661
FBXO33
F-box protein 33.
      
 0.532
WDR78
WD repeat domain 78.
      
 0.518
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
      
 0.507
WDR63
WD repeat domain 63.
      
 0.506
CNOT6
CCR4-NOT transcription complex subunit 6.
      
 0.503
CAMSAP1
Calmodulin regulated spectrin associated protein 1.
 
 
 
 0.464
NOS1AP
PID domain-containing protein.
      
 0.461
NME6
Nucleoside diphosphate kinase.
    
 
 0.400
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.