Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C2CD2 | FAM92A | ENSCSAP00000004457 | ENSCSAP00000008955 | C2 calcium dependent domain containing 2. | Family with sequence similarity 92 member A. | 0.519 |
C2CD2 | TM2D1 | ENSCSAP00000004457 | ENSCSAP00000016682 | C2 calcium dependent domain containing 2. | TM2 domain containing 1. | 0.537 |
C2CD2 | TRDMT1 | ENSCSAP00000004457 | ENSCSAP00000008887 | C2 calcium dependent domain containing 2. | tRNA aspartic acid methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.550 |
FAM92A | C2CD2 | ENSCSAP00000008955 | ENSCSAP00000004457 | Family with sequence similarity 92 member A. | C2 calcium dependent domain containing 2. | 0.519 |
FAM92A | TM2D1 | ENSCSAP00000008955 | ENSCSAP00000016682 | Family with sequence similarity 92 member A. | TM2 domain containing 1. | 0.528 |
FAM92A | TRDMT1 | ENSCSAP00000008955 | ENSCSAP00000008887 | Family with sequence similarity 92 member A. | tRNA aspartic acid methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.527 |
FBXO4 | TM2D1 | ENSCSAP00000012852 | ENSCSAP00000016682 | F-box protein 4. | TM2 domain containing 1. | 0.463 |
FBXO4 | TRDMT1 | ENSCSAP00000012852 | ENSCSAP00000008887 | F-box protein 4. | tRNA aspartic acid methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.408 |
IQGAP3 | TM2D1 | ENSCSAP00000015890 | ENSCSAP00000016682 | IQ motif containing GTPase activating protein 3. | TM2 domain containing 1. | 0.501 |
LAMTOR2 | LAMTOR4 | ENSCSAP00000015940 | ENSCSAP00000013874 | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2. | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4. | 0.999 |
LAMTOR2 | LOC103232026 | ENSCSAP00000015940 | ENSCSAP00000017867 | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2. | Uncharacterized protein. | 0.999 |
LAMTOR2 | NHLRC2 | ENSCSAP00000015940 | ENSCSAP00000001405 | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2. | NHL repeat containing 2. | 0.657 |
LAMTOR2 | TM2D1 | ENSCSAP00000015940 | ENSCSAP00000016682 | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2. | TM2 domain containing 1. | 0.484 |
LAMTOR2 | TM2D2 | ENSCSAP00000015940 | ENSCSAP00000011472 | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2. | TM2 domain containing 2. | 0.539 |
LAMTOR4 | LAMTOR2 | ENSCSAP00000013874 | ENSCSAP00000015940 | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4. | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2. | 0.999 |
LAMTOR4 | LOC103232026 | ENSCSAP00000013874 | ENSCSAP00000017867 | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4. | Uncharacterized protein. | 0.999 |
LAMTOR4 | NHLRC2 | ENSCSAP00000013874 | ENSCSAP00000001405 | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4. | NHL repeat containing 2. | 0.548 |
LAMTOR4 | TM2D1 | ENSCSAP00000013874 | ENSCSAP00000016682 | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4. | TM2 domain containing 1. | 0.506 |
LAMTOR4 | TM2D2 | ENSCSAP00000013874 | ENSCSAP00000011472 | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4. | TM2 domain containing 2. | 0.526 |
LOC103232026 | LAMTOR2 | ENSCSAP00000017867 | ENSCSAP00000015940 | Uncharacterized protein. | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2. | 0.999 |
page 1 of 3