STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC28BCoiled-coil domain containing 28B. (200 aa)    
Predicted Functional Partners:
KIF15
Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.558
BBS1
BBS1 domain-containing protein.
    
 
 0.540
BBS4
Bardet-Biedl syndrome 4.
    
 
 0.533
NR4A1
Nuclear receptor subfamily 4 group A member 1.
      
 0.525
CD200
CD200 molecule.
      
 0.521
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 
 0.511
TTC8
Tetratricopeptide repeat domain 8.
    
 
 0.506
AQP9
Aquaporin 9; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.483
TNFRSF9
TNF receptor superfamily member 9.
      
 0.482
TIMP2
TIMP metallopeptidase inhibitor 2.
      
 0.481
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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