Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
PPP1R8Protein phosphatase 1 regulatory subunit 8. (351 aa)    
Predicted Functional Partners:
PPP1R11
Protein phosphatase 1 regulatory inhibitor subunit 11.
    
 
 0.955
PPP1CC
Serine/threonine-protein phosphatase.
   
 
 0.935
TCERG1
Transcription elongation regulator 1.
   
 
  0.912
SUGP1
SURP and G-patch domain containing 1.
     
  0.905
CDC40
Cell division cycle 40.
     
  0.905
RBM39
RNA binding motif protein 39.
    
 0.901
HTATSF1
HIV-1 Tat specific factor 1.
     
  0.899
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.884
DHX9
DExH-box helicase 9.
   
 
  0.876
SRRT
Serrate, RNA effector molecule.
   
 
  0.859
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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