Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAX7Paired box 7. (520 aa)    
Predicted Functional Partners:
PAX3
Paired box 3.
  
 
0.963
NCOA1
Nuclear receptor coactivator.
     
 0.771
MYOD1
Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.
   
 
 0.749
SOX10
SRY-box transcription factor 10.
   
 0.740
MYOG
Myogenin.
   
 
 0.736
MYF5
Myogenic factor 5.
   
 
 0.718
CTNNB1
Catenin beta 1.
    
 0.695
SOX9
SRY-box transcription factor 9.
   
 0.676
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.671
FOXO1
Forkhead box O1.
    
 0.647
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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