STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VWA1Von Willebrand factor A domain containing 1. (438 aa)    
Predicted Functional Partners:
FREM2
FRAS1 related extracellular matrix 2.
    
 0.644
FAM20C
FAM20C golgi associated secretory pathway kinase.
    
  0.521
OIT3
Oncoprotein induced transcript 3.
    
 0.497
CFAP36
Cilia and flagella associated protein 36.
      
 0.475
LTBP4
Latent transforming growth factor beta binding protein 4.
   
 0.435
COL19A1
Uncharacterized protein.
   
  
 0.435
FAM81B
Family with sequence similarity 81 member B.
      
 0.426
SSU72
SSU72 homolog, RNA polymerase II CTD phosphatase.
      
 0.422
COL4A2
Collagen type IV alpha 2 chain.
   
  
 0.408
ARFRP1
ADP ribosylation factor related protein 1.
    
 
 0.405
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.