Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXD3Forkhead box D3. (478 aa)    
Predicted Functional Partners:
MYB
MYB proto-oncogene, transcription factor.
    
 0.843
PAX3
Paired box 3.
    
 0.840
NF1
Neurofibromin 1.
   
 
 0.777
HOXC4
Homeobox C4.
    
 0.769
TRPS1
Transcriptional repressor GATA binding 1.
    
 0.726
SLC45A1
Solute carrier family 45 member 1.
    
 
 0.724
ASCC2
Activating signal cointegrator 1 complex subunit 2.
      
 0.714
DUS1L
Dihydrouridine synthase 1 like.
   
   0.714
PAX6
Paired box 6.
    
 0.709
CARMIL2
Capping protein regulator and myosin 1 linker 2.
    
   0.708
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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