STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPH2Heterogeneous nuclear ribonucleoprotein H2. (449 aa)    
Predicted Functional Partners:
SRSF11
Serine and arginine rich splicing factor 11.
   
 0.847
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.841
SRSF10
Serine and arginine rich splicing factor 10.
   
 0.812
ZNF638
Zinc finger protein 638.
   
 
 0.763
ENSCSAP00000004881
RRM domain-containing protein.
   
 0.743
PTBP2
Polypyrimidine tract binding protein 2.
   
 0.741
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.711
YTHDC1
YTH domain containing 1.
   
  
 0.678
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.655
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.652
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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