STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUNDC1Uncharacterized protein. (155 aa)    
Predicted Functional Partners:
PGAM5
PGAM family member 5, mitochondrial serine/threonine protein phosphatase.
     
 0.986
ULK1
Unc-51 like autophagy activating kinase 1.
    
 0.975
GABARAP
GABA type A receptor-associated protein.
   
 0.969
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.966
GABARAPL1
GABA type A receptor associated protein like 1.
   
 0.962
SRC
Tyrosine-protein kinase.
    
 0.956
CSNK2A2
Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.
   
 
 0.953
CSNK2B
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
     
 0.953
CSNK2A1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.952
MAP1LC3B
Uncharacterized protein.
    
 0.947
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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