STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C16orf54Chromosome 16 open reading frame 54. (224 aa)    
Predicted Functional Partners:
ASPHD1
Aspartate beta-hydroxylase domain containing 1.
      
 0.555
QPRT
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family.
      
 0.537
CDIPT
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.509
KCTD7
Potassium channel tetramerization domain containing 7.
      
 0.505
PUM2
Pumilio RNA binding family member 2.
      
 0.477
SPATA2L
Spermatogenesis associated 2 like.
  
     0.447
ASPHD2
Aspartate beta-hydroxylase domain containing 2.
      
 0.426
KLF4
Kruppel like factor 4.
  
     0.400
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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