STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASCL1Achaete-scute family bHLH transcription factor 1. (239 aa)    
Predicted Functional Partners:
MYT1L
Myelin transcription factor 1 like.
   
  
 0.854
DLX2
Distal-less homeobox 2.
      
 0.759
TCF12
Transcription factor 12.
   
 0.743
LMX1A
LIM homeobox transcription factor 1 alpha.
    
 0.717
TCF4
Transcription factor 4.
   
 0.697
NEUROG2
Neurogenin 2.
   
 
 0.692
LHX6
LIM homeobox 6.
    
 0.674
TCF3
Transcription factor 3.
   
 0.673
NEUROG1
Neurogenin 1.
   
 
 0.663
DLX1
Distal-less homeobox 1.
   
  
 0.650
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.