Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BARD1 | CENPA | ENSCSAP00000005594 | ENSCSAP00000005543 | BRCA1 associated RING domain 1. | Centromere protein A. | 0.443 |
BARD1 | EP300 | ENSCSAP00000005594 | ENSCSAP00000002153 | BRCA1 associated RING domain 1. | E1A binding protein p300. | 0.412 |
BARD1 | H2BC11 | ENSCSAP00000005594 | ENSCSAP00000018597 | BRCA1 associated RING domain 1. | Histone H2B; Belongs to the histone H2B family. | 0.566 |
BARD1 | H2BC3 | ENSCSAP00000005594 | ENSCSAP00000018607 | BRCA1 associated RING domain 1. | Histone H2B; Belongs to the histone H2B family. | 0.461 |
BARD1 | H2BC5 | ENSCSAP00000005594 | ENSCSAP00000004160 | BRCA1 associated RING domain 1. | Histone H2B; Belongs to the histone H2B family. | 0.761 |
BARD1 | HIST1H2BO | ENSCSAP00000005594 | ENSCSAP00000018586 | BRCA1 associated RING domain 1. | Histone H2B; Belongs to the histone H2B family. | 0.458 |
BARD1 | LOC103221971 | ENSCSAP00000005594 | ENSCSAP00000018748 | BRCA1 associated RING domain 1. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.814 |
BARD1 | LOC103221972 | ENSCSAP00000005594 | ENSCSAP00000018596 | BRCA1 associated RING domain 1. | Histone H2B; Belongs to the histone H2B family. | 0.633 |
BARD1 | LOC103222003 | ENSCSAP00000005594 | ENSCSAP00000018608 | BRCA1 associated RING domain 1. | Histone H2A; Belongs to the histone H2A family. | 0.844 |
BARD1 | MYSM1 | ENSCSAP00000005594 | ENSCSAP00000016691 | BRCA1 associated RING domain 1. | Myb like, SWIRM and MPN domains 1. | 0.772 |
CENPA | BARD1 | ENSCSAP00000005543 | ENSCSAP00000005594 | Centromere protein A. | BRCA1 associated RING domain 1. | 0.443 |
CENPA | EP300 | ENSCSAP00000005543 | ENSCSAP00000002153 | Centromere protein A. | E1A binding protein p300. | 0.508 |
CENPA | H2BC11 | ENSCSAP00000005543 | ENSCSAP00000018597 | Centromere protein A. | Histone H2B; Belongs to the histone H2B family. | 0.676 |
CENPA | H2BC3 | ENSCSAP00000005543 | ENSCSAP00000018607 | Centromere protein A. | Histone H2B; Belongs to the histone H2B family. | 0.678 |
CENPA | H2BC5 | ENSCSAP00000005543 | ENSCSAP00000004160 | Centromere protein A. | Histone H2B; Belongs to the histone H2B family. | 0.772 |
CENPA | HIST1H2BO | ENSCSAP00000005543 | ENSCSAP00000018586 | Centromere protein A. | Histone H2B; Belongs to the histone H2B family. | 0.670 |
CENPA | LOC103221971 | ENSCSAP00000005543 | ENSCSAP00000018748 | Centromere protein A. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.926 |
CENPA | LOC103221972 | ENSCSAP00000005543 | ENSCSAP00000018596 | Centromere protein A. | Histone H2B; Belongs to the histone H2B family. | 0.576 |
CENPA | LOC103222003 | ENSCSAP00000005543 | ENSCSAP00000018608 | Centromere protein A. | Histone H2A; Belongs to the histone H2A family. | 0.839 |
CENPA | MYSM1 | ENSCSAP00000005543 | ENSCSAP00000016691 | Centromere protein A. | Myb like, SWIRM and MPN domains 1. | 0.589 |
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