STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRTM1Leucine rich repeat transmembrane neuronal 1. (522 aa)    
Predicted Functional Partners:
CLSTN3
Calsyntenin 3.
   
  
 0.920
CBLN1
Cerebellin 1 precursor.
   
 0.829
NRXN1
Neurexin 1.
   
 0.681
KCNS3
Potassium voltage-gated channel modifier subfamily S member 3; Belongs to the potassium channel family.
   
 
 0.674
NRXN2
Neurexin 2.
   
 0.645
CTNNA2
Uncharacterized protein.
   
 0.621
TRAPPC10
Uncharacterized protein.
      
 0.610
NXPH1
Neurexophilin; May be signaling molecules that resemble neuropeptides.
   
  
 0.610
RAB12
RAB12, member RAS oncogene family.
    
  0.595
NRXN3
4.1m domain-containing protein.
   
 0.570
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.