STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM56Tripartite motif containing 56. (755 aa)    
Predicted Functional Partners:
TRIM32
Tripartite motif containing 32.
    
 0.749
TRIM38
Tripartite motif containing 38.
   
 
 0.648
TRIM23
Tripartite motif containing 23.
    
0.638
STING1
Transmembrane protein 173.
   
 0.631
TRIM21
Tripartite motif containing 21.
    
 
 0.626
TRIM29
Tripartite motif containing 29.
    
 
 0.620
TRIM41
Tripartite motif containing 41.
    
 
 0.612
TRIM27
Tripartite motif containing 27.
    
 
 0.612
TRIM25
Tripartite motif containing 25.
    
 
 0.582
TRIM5
Uncharacterized protein.
      
 0.543
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.