STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEUROD6Neurogenic differentiation factor. (337 aa)    
Predicted Functional Partners:
INSM1
INSM transcriptional repressor 1.
   
 0.832
TBR1
T-box brain transcription factor 1.
   
  
 0.744
ISL2
ISL LIM homeobox 2.
   
 
 0.641
PAX6
Paired box 6.
   
 
 0.538
PPP1R17
Protein phosphatase 1 regulatory subunit 17.
   
  
 0.532
GART
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
   
  
 0.437
FOXG1
Forkhead box G1.
   
  
 0.428
RACK1
Receptor for activated C kinase 1.
      
 0.423
SATB2
DNA-binding protein SATB.
   
  
 0.421
PKDCC
Protein kinase domain containing, cytoplasmic.
   
  
 0.406
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.