STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL41409.1PFAM: transposase IS4 family protein; KEGG: ate:Athe_2221 transposase IS4 family protein. (314 aa)    
Predicted Functional Partners:
ADL41411.1
PFAM: protein of unknown function DUF1355; KEGG: ate:Athe_0038 hypothetical protein.
 
     0.779
ADL41414.1
KEGG: ate:Athe_0041 hypothetical protein.
 
     0.769
ADL43320.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2295 S-layer domain protein.
  
     0.755
ADL41726.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_0438 S-layer domain protein.
  
     0.752
ADL41810.1
KEGG: ate:Athe_0542 hypothetical protein.
  
     0.751
ADL41937.1
PFAM: peptidase M20; KEGG: ate:Athe_0663 peptidase M42 family protein.
  
     0.751
ADL43031.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
  
     0.750
ADL43169.1
KEGG: ate:Athe_2120 Ig domain protein group 2 domain protein; PFAM: Ig domain protein group 2 domain protein; Thrombospondin type 3 repeat-containing protein; von Willebrand factor type A; SMART: von Willebrand factor type A; Ig domain protein group 2 domain protein; Parallel beta-helix repeat.
  
     0.750
ADL42972.1
KEGG: csc:Csac_1059 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
  
     0.742
ADL43367.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2342 S-layer domain protein.
  
     0.738
Your Current Organism:
Caldicellulosiruptor obsidiansis
NCBI taxonomy Id: 608506
Other names: C. obsidiansis OB47, Caldicellulosiruptor obsidiansis OB47, Caldicellulosiruptor obsidiansis str. OB47, Caldicellulosiruptor obsidiansis strain OB47, Caldicellulosiruptor sp. OB47
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