STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL42234.1PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_1696 DNA polymerase beta subunit. (105 aa)    
Predicted Functional Partners:
ADL43238.1
PFAM: protein of unknown function DUF86; KEGG: ate:Athe_2194 protein of unknown function DUF86.
 
 
 
 0.792
ADL42235.1
PFAM: flagellar protein FlaG protein; KEGG: csc:Csac_1698 flagellar protein FlaG protein.
       0.515
ADL42459.1
PFAM: PilT protein domain protein; KEGG: csc:Csac_1947 PilT domain-containing protein.
  
     0.502
ADL42236.1
Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
       0.494
ADL41486.1
KEGG: CRISPR-associated CXXC_CXXC protein Cst1; TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1; PFAM: CRISPR-associated protein, CXXC-CXXC region.
  
     0.406
Your Current Organism:
Caldicellulosiruptor obsidiansis
NCBI taxonomy Id: 608506
Other names: C. obsidiansis OB47, Caldicellulosiruptor obsidiansis OB47, Caldicellulosiruptor obsidiansis str. OB47, Caldicellulosiruptor obsidiansis strain OB47, Caldicellulosiruptor sp. OB47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.