STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL42622.1TIGRFAM: methyltransferase; KEGG: ate:Athe_1226 methyltransferase; PFAM: Conserved hypothetical protein CHP00095. (184 aa)    
Predicted Functional Partners:
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
 
  
 0.964
ADL42620.1
KEGG: ate:Athe_1228 hypothetical protein.
  
    0.894
ADL43563.1
Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
  
    0.746
ADL42625.1
DAK2 domain fusion protein YloV; KEGG: ate:Athe_1223 Dak phosphatase; TIGRFAM: DAK2 domain fusion protein YloV; PFAM: Dak phosphatase.
 
     0.597
ADL42623.1
PFAM: small acid-soluble spore protein alpha/beta type; KEGG: ate:Athe_1225 small acid-soluble spore protein alpha/beta type.
       0.543
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.540
ADL42626.1
PFAM: protein of unknown function DUF322; KEGG: ate:Athe_1222 protein of unknown function DUF322.
  
    0.534
ADL42629.1
KEGG: ate:Athe_1219 RNA methylase, NOL1/NOP2/sun family; TIGRFAM: RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein.
     
 0.521
ADL42772.1
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
 
   
 0.477
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
    0.463
Your Current Organism:
Caldicellulosiruptor obsidiansis
NCBI taxonomy Id: 608506
Other names: C. obsidiansis OB47, Caldicellulosiruptor obsidiansis OB47, Caldicellulosiruptor obsidiansis str. OB47, Caldicellulosiruptor obsidiansis strain OB47, Caldicellulosiruptor sp. OB47
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