STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE93197.1Branched-chain amino acid ABC transporter, permease protein; KEGG: dth:DICTH_0294 1.5e-13 ribose transport system permease protein RbsC K10440; Psort location: CytoplasmicMembrane, score: 10.00. (309 aa)    
Predicted Functional Partners:
EFE93195.1
KEGG: cth:Cthe_1579 8.8e-182 ABC transporter related protein; K02056 simple sugar transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.990
EFE93196.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: bac:BamMC406_4659 3.5e-13 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
0.987
EFE92264.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: bmu:Bmul_5961 8.1e-10 monosaccharide-transporting ATPase K02057; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the binding-protein-dependent transport system permease family.
 
 0.967
EFE92265.1
ABC transporter, ATP-binding protein; KEGG: tpt:Tpet_0821 3.5e-130 ABC transporter related; K02056 simple sugar transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.961
EFE93191.1
Basic membrane protein; KEGG: bcy:Bcer98_0564 0.0022 monosaccharide-transporting ATPase K10439.
 
 
 0.916
EFE92267.1
Basic membrane protein; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.916
EFE91264.1
Basic membrane protein; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.706
EFE93194.1
Hypothetical protein; KEGG: cth:Cthe_1578 2.9e-39 radical SAM family protein; K04069 pyruvate formate lyase activating enzyme; Psort location: Cytoplasmic, score: 9.98.
       0.672
EFE93198.1
Hypothetical protein; KEGG: tbd:Tbd_2668 2.3e-12 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923; Psort location: CytoplasmicMembrane, score: 9.99.
       0.473
Your Current Organism:
Oribacterium sp. F0262
NCBI taxonomy Id: 608534
Other names: O. sp. oral taxon 078 str. F0262, Oribacterium sp. oral taxon 078 str. F0262, Oribacterium sp. oral taxon 078 strain F0262
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