STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE92510.1Transcriptional regulator, MarR family; Psort location: Cytoplasmic, score: 8.87. (180 aa)    
Predicted Functional Partners:
EFE91533.1
PTS system, glucose-like IIB component; KEGG: ssa:SSA_0456 1.5e-129 scrA; phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific, putative; K02808 PTS system, sucrose-specific IIA component; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.953
fabZ
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
       0.807
fabF
Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
     0.803
EFE91027.1
Hypothetical protein; KEGG: cbe:Cbei_4532 1.4e-11 PTS system, N-acetylglucosamine-specific IIBC subunit; K02803 PTS system, N-acetylglucosamine-specific IIB component K02804; Psort location: CytoplasmicMembrane, score: 9.75.
     
 0.751
EFE92507.1
Hypothetical protein.
       0.723
EFE92506.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.703
EFE92505.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.683
fabD
[acyl-carrier-protein] S-malonyltransferase; KEGG: tex:Teth514_1724 1.5e-60 malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
     0.669
EFE92504.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.664
fabHA
KEGG: ctc:CTC00127 3.4e-61 3-oxoacyl-(acyl carrier protein) synthase III K00648; Psort location: Cytoplasmic, score: 8.87.
 
     0.585
Your Current Organism:
Oribacterium sp. F0262
NCBI taxonomy Id: 608534
Other names: O. sp. oral taxon 078 str. F0262, Oribacterium sp. oral taxon 078 str. F0262, Oribacterium sp. oral taxon 078 strain F0262
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.