STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argRArginine repressor, C-terminal domain protein; Regulates arginine biosynthesis genes. (149 aa)    
Predicted Functional Partners:
nadK
NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
  
 0.869
rrmJ
Ribosomal RNA large subunit methyltransferase J; KEGG: scl:sce8313 1.1e-48 hypothetical protein K06442; Psort location: Cytoplasmic, score: 8.87.
  
    0.852
argH
KEGG: cpy:Cphy_3006 1.3e-148 argininosuccinate lyase; K01755 argininosuccinate lyase; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.815
argG
KEGG: cpy:Cphy_1931 3.7e-158 argininosuccinate synthase K01940; Psort location: Cytoplasmic, score: 8.87; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.810
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
  
    0.799
recN
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
  
  
 0.776
EFE91373.1
KEGG: cpy:Cphy_2512 7.3e-59 polyprenyl synthetase; K00795 geranyltranstransferase; Psort location: Cytoplasmic, score: 9.98; Belongs to the FPP/GGPP synthase family.
     
 0.751
EFE91374.1
Hypothetical protein; KEGG: cpy:Cphy_2513 3.3e-08 exonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit; Psort location: Cytoplasmic, score: 8.87.
       0.693
EFE91377.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.685
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.641
Your Current Organism:
Oribacterium sp. F0262
NCBI taxonomy Id: 608534
Other names: O. sp. oral taxon 078 str. F0262, Oribacterium sp. oral taxon 078 str. F0262, Oribacterium sp. oral taxon 078 strain F0262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.