Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
argRArginine repressor, C-terminal domain protein; Regulates arginine biosynthesis genes. (149 aa)    
Predicted Functional Partners:
nadK
NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
  
 0.860
argG
KEGG: cpy:Cphy_1931 3.7e-158 argininosuccinate synthase K01940; Psort location: Cytoplasmic, score: 8.87; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.859
argH
KEGG: cpy:Cphy_3006 1.3e-148 argininosuccinate lyase; K01755 argininosuccinate lyase; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.850
rrmJ
Ribosomal RNA large subunit methyltransferase J; KEGG: scl:sce8313 1.1e-48 hypothetical protein K06442; Psort location: Cytoplasmic, score: 8.87.
  
    0.847
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
  
    0.793
recN
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
  
  
 0.761
EFE91373.1
KEGG: cpy:Cphy_2512 7.3e-59 polyprenyl synthetase; K00795 geranyltranstransferase; Psort location: Cytoplasmic, score: 9.98; Belongs to the FPP/GGPP synthase family.
     
 0.745
EFE91374.1
Hypothetical protein; KEGG: cpy:Cphy_2513 3.3e-08 exonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit; Psort location: Cytoplasmic, score: 8.87.
       0.706
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
  
 0.678
ygeW
Putative carbamoyltransferase YgeW; KEGG: aha:AHA_2161 3.2e-136 hypothetical protein; K00611 ornithine carbamoyltransferase; Psort location: Cytoplasmic, score: 9.98.
  
  
 0.678
Your Current Organism:
Oribacterium sp. F0262
NCBI taxonomy Id: 608534
Other names: O. sp. oral taxon 078 str. F0262, Oribacterium sp. oral taxon 078 str. F0262, Oribacterium sp. oral taxon 078 strain F0262
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