STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTH_0029Outer membrane efflux protein. (423 aa)    
Predicted Functional Partners:
HTH_0028
Multidrug resistance efflux pump.
 
 
 0.932
HTH_0032
Efflux transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.922
HTH_0031
Outer membrane efflux protein.
 
    
0.839
HTH_0033
Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.807
HTH_0026
Permease of the major facilitator superfamily.
  
    0.789
HTH_0027
Permease of the major facilitator superfamily.
  
    0.789
HTH_0030
Transcriptional regulator, TetR family.
     
 0.789
HTH_1727
Acriflavin resistance protein; Efflux transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.722
HTH_0581
Hypothetical protein.
  
 
 0.709
HTH_1508
Cation efflux system; CzcB-like; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.675
Your Current Organism:
Hydrogenobacter thermophilus
NCBI taxonomy Id: 608538
Other names: H. thermophilus TK-6, Hydrogenobacter thermophilus DSM 6534, Hydrogenobacter thermophilus TK-6, Hydrogenobacter thermophilus str. TK-6, Hydrogenobacter thermophilus strain TK-6
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