STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTH_0048ABC-type metal ion transport system permease component. (275 aa)    
Predicted Functional Partners:
HTH_0047
ABC-type metal ion transport system ATPase component.
 
 0.999
HTH_0046
ABC-type metal ion transport system periplasmic component/surface adhesin.
 
 
 0.996
HTH_1403
Metal ion ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.918
HTH_0045
ABC-type multidrug transport system permease component.
    
  0.806
HTH_0044
ABC-type multidrug transport system ATPase component.
     
 0.723
HTH_1402
Metal ion ABC transporter permease.
  
  
  0.712
pheT
phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.547
fur2
Transcriptional regulator, Fur family; Belongs to the Fur family.
 
  
 0.436
fur1
Transcriptional regulator, Fur family; Belongs to the Fur family.
 
  
 0.430
HTH_0238
ABC transporter ATP-binding protein.
     
 0.428
Your Current Organism:
Hydrogenobacter thermophilus
NCBI taxonomy Id: 608538
Other names: H. thermophilus TK-6, Hydrogenobacter thermophilus DSM 6534, Hydrogenobacter thermophilus TK-6, Hydrogenobacter thermophilus str. TK-6, Hydrogenobacter thermophilus strain TK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.