STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTH_0498NADH ubiquinone oxidoreductase 20 kDa subunit/hydrogenase. (203 aa)    
Predicted Functional Partners:
HTH_0497
Nickel-dependent hydrogenase large subunit.
 
 0.999
HTH_0580
Oxidoreductase FAD/NAD(P)-binding.
 
  
 0.980
HTH_0592
4Fe-4S ferredoxin, iron-sulfur binding protein.
 
  
 0.979
HTH_0156
Cytochrome b/b6.
  
 
 0.977
sqr
Sulfide:quinone oxidoreductase.
     
  0.900
hupL2
Ni,Fe-hydrogenase large subunit.
 
 
 0.863
hdrA
Heterodisulfide reductase subunit A.
  
 
 0.843
hynL
Ni,Fe-hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 
 0.827
hoxL
Ni,Fe-hydrogenase large subunit.
  
 
 0.827
hupL1
Ni,Fe-hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 
 0.827
Your Current Organism:
Hydrogenobacter thermophilus
NCBI taxonomy Id: 608538
Other names: H. thermophilus TK-6, Hydrogenobacter thermophilus DSM 6534, Hydrogenobacter thermophilus TK-6, Hydrogenobacter thermophilus str. TK-6, Hydrogenobacter thermophilus strain TK-6
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