STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTH_0612Hypothetical protein. (390 aa)    
Predicted Functional Partners:
HTH_1464
Integral membrane protein.
  
     0.728
HTH_1525
Hypothetical protein.
  
     0.719
HTH_0102
Hypothetical protein.
  
     0.625
HTH_1422
Hypothetical protein.
  
     0.577
timA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.540
HTH_1353
Hypothetical protein.
  
     0.516
HTH_0347
Sterol-binding domain protein.
  
     0.496
HTH_0050
Hypothitical protein.
  
     0.456
HTH_0358
Hypothetical protein.
  
     0.454
atpH
ATP synthase F1 delta chain.
  
     0.433
Your Current Organism:
Hydrogenobacter thermophilus
NCBI taxonomy Id: 608538
Other names: H. thermophilus TK-6, Hydrogenobacter thermophilus DSM 6534, Hydrogenobacter thermophilus TK-6, Hydrogenobacter thermophilus str. TK-6, Hydrogenobacter thermophilus strain TK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.