STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sorBSulfite:cytochrome c oxidoreductase subunit B. (93 aa)    
Predicted Functional Partners:
sorA
Sulfite:cytochrome c oxidoreductase subunit A.
 
 
   0.968
HTH_0808
Geranylgeranyl reductase.
       0.727
HTH_0809
Conserved hypothetical protein.
       0.727
soxB
Sulfur oxidation protein; Belongs to the 5'-nucleotidase family.
  
  
 0.687
HTH_1456
Oxidoreductase molybdopterin binding.
 
 
   0.621
nosZ
Nitrous oxide reductase.
  
    0.492
HTH_0805
ATP-dependent RNA helicase.
       0.490
soxZ
Sulfur oxidation protein.
 
     0.428
soxY
Sulfur oxidation protein.
 
     0.411
soxA2
Diheme cytochrome c; C-type diheme cytochrome, which is part of the SoxAX cytochrome complex involved in sulfur oxidation. The SoxAX complex catalyzes the formation of a heterodisulfide bond between the conserved cysteine residue on a sulfur carrier SoxYZ complex subunit SoxY and thiosulfate or other inorganic sulfur substrates. This leads to the liberation of two electrons, which may be transferred from the SoxAX complex to another cytochrome c that then channels them into the respiratory electron transport chain. Some electrons may be used for reductive CO(2) fixation.
 
     0.411
Your Current Organism:
Hydrogenobacter thermophilus
NCBI taxonomy Id: 608538
Other names: H. thermophilus TK-6, Hydrogenobacter thermophilus DSM 6534, Hydrogenobacter thermophilus TK-6, Hydrogenobacter thermophilus str. TK-6, Hydrogenobacter thermophilus strain TK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.