STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTH_0929Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (813 aa)    
Predicted Functional Partners:
HTH_0930
Formate dehydrogenase beta subunit.
 0.997
HTH_0931
Formate dehydrogenase gamma subunit.
 
 0.996
HTH_0928
Formate dehydrogenase alpha subunit.
     0.993
fdhE
Formate dehydrogenase formation protein FdhE; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
 
 
 0.961
HTH_0156
Cytochrome b/b6.
  
 
 0.933
fdsA
NAD-dependent formate dehydrogenase alpha subunit.
  
 
0.910
fdsB
NAD-dependent formate dehydrogenase beta subunit.
    
 0.904
fdsG
NAD-dependent formate dehydrogenase gamma subunit.
    
 0.903
fdsD
NAD-dependent formate dehydrogenase delta subunit.
     
 0.900
pycA
Pyruvate carboxylase large subunit.
     
 0.815
Your Current Organism:
Hydrogenobacter thermophilus
NCBI taxonomy Id: 608538
Other names: H. thermophilus TK-6, Hydrogenobacter thermophilus DSM 6534, Hydrogenobacter thermophilus TK-6, Hydrogenobacter thermophilus str. TK-6, Hydrogenobacter thermophilus strain TK-6
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