STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hupS2Ni,Fe-hydrogenase small subunit. (285 aa)    
Predicted Functional Partners:
hupL2
Ni,Fe-hydrogenase large subunit.
 0.998
hoxL
Ni,Fe-hydrogenase large subunit.
 0.994
hynL
Ni,Fe-hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.989
hupL1
Ni,Fe-hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.988
hynS
Ni,Fe-hydrogenase small subunit.
  
  
 
0.922
hupC
Hydrogenase cytochrome b subunit.
 
 
 0.919
hupS1
Ni,Fe-hydrogenase small subunit.
  
  
 
0.919
hoxS
Ni,Fe-hydrogenase small subunit.
  
  
 
0.909
hypB
Hydrogenase accessory protein.
  
  
 0.847
hoxM
Ni,Fe-hydrogenase maturation factor.
 
  
 0.807
Your Current Organism:
Hydrogenobacter thermophilus
NCBI taxonomy Id: 608538
Other names: H. thermophilus TK-6, Hydrogenobacter thermophilus DSM 6534, Hydrogenobacter thermophilus TK-6, Hydrogenobacter thermophilus str. TK-6, Hydrogenobacter thermophilus strain TK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.