STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL03153.1KEGG: tex:Teth514_0555 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter. (403 aa)    
Predicted Functional Partners:
ADL03154.1
PFAM: nitrogen regulatory protein P-II; KEGG: eel:EUBELI_01823 nitrogen regulatory protein P-II 1; Belongs to the P(II) protein family.
 
 0.999
ADL05832.1
KEGG: str:Sterm_0909 hypothetical protein.
  
 
 0.965
ADL06393.1
Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; histidine kinase HAMP region domain protein; Cache type 2 domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: amt:Amet_0967 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAS domain containing protein; histidine kinase HAMP region domain protein; metal-dependent phosphohydrolase HD region.
    
 0.670
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.598
ADL05054.1
KEGG: eel:EUBELI_01411 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein.
 
   
 0.587
ADL04713.1
PFAM: aconitate hydratase domain protein; KEGG: afn:Acfer_1973 aconitate hydratase domain protein.
  
 
 0.568
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.527
ADL06429.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: cbe:Cbei_2460 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein.
 
    
 0.518
ADL03875.1
KEGG: eel:EUBELI_00431 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
  
  
 0.509
ADL05427.1
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: cbe:Cbei_2460 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein.
 
    
 0.506
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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