STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL03313.1PFAM: protein of unknown function DUF1700; KEGG: cpy:Cphy_0363 hypothetical protein. (157 aa)    
Predicted Functional Partners:
ADL06694.1
KEGG: tva:TVAG_386850 hypothetical protein.
  
     0.748
ADL04533.1
KEGG: eel:EUBELI_00953 hypothetical protein.
  
     0.738
ADL03513.1
KEGG: eel:EUBELI_00775 hypothetical protein.
  
     0.735
ADL05034.1
KEGG: eel:EUBELI_00727 hypothetical protein.
  
     0.726
ADL06699.1
KEGG: cpy:Cphy_3443 hypothetical protein.
  
     0.722
ADL04324.1
KEGG: cpy:Cphy_1351 hypothetical protein.
  
     0.720
ADL02868.1
PFAM: GCN5-related N-acetyltransferase; KEGG: cdl:CDR20291_2369 hypothetical protein.
  
     0.718
ADL04926.1
KEGG: eel:EUBELI_01345 hypothetical protein.
  
     0.703
ADL04928.1
KEGG: ere:EUBREC_1826 hypothetical protein.
  
     0.695
ADL02714.1
KEGG: eel:EUBELI_01971 hypothetical protein.
  
     0.694
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.