STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL03548.1KEGG: ere:EUBREC_1411 lactoylglutathione lyase related lyase. (71 aa)    
Predicted Functional Partners:
ADL03547.1
PFAM: glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; glycosyl hydrolase 38 domain protein; KEGG: tpd:Teth39_0612 alpha-mannosidase.
       0.773
ADL03546.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gym:GYMC10_4722 binding-protein-dependent transport systems inner membrane component.
       0.709
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.699
ADL03545.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gym:GYMC10_4723 binding-protein-dependent transport systems inner membrane component.
       0.690
ADL04295.1
KEGG: cpy:Cphy_3558 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate protein domain protein TPP-binding.
  
  
 0.678
ADL05536.1
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: cbl:CLK_2702 electron transfer flavoprotein, alpha subunit/FixB family protein.
  
  
 0.526
ADL03653.1
Selenate reductase YgfK; KEGG: bhy:BHWA1_00069 oxidoreductase, Fe-S subunit; TIGRFAM: selenate reductase YgfK; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 0.447
ADL02951.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
  
 0.440
ADL05426.1
PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: cpy:Cphy_1098 FAD dependent oxidoreductase.
  
  
 0.426
ADL03550.1
Transcriptional regulator, MarR family; KEGG: shi:Shel_22260 transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
     
 0.411
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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