STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL03685.1KEGG: ere:EUBREC_3590 transporter; PFAM: ABC transporter related; SMART: AAA ATPase. (288 aa)    
Predicted Functional Partners:
ADL03686.1
KEGG: ere:EUBREC_3591 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
 
  
 0.967
ADL03684.1
KEGG: ere:EUBREC_3589 hypothetical protein.
 
   
 0.952
ADL03094.1
KEGG: cpy:Cphy_3514 hypothetical protein.
  
 
 0.560
ADL06182.1
KEGG: ate:Athe_2367 hypothetical protein.
  
 
 0.560
ADL06722.1
KEGG: cce:Ccel_2157 hypothetical protein.
  
 
 0.558
ADL04298.1
Transcriptional regulator, GntR family; KEGG: amt:Amet_1323 regulatory protein GntR, HTH; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
 
  
 0.539
ADL05689.1
Transcriptional regulator, GntR family; KEGG: ckr:CKR_3395 hypothetical protein; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
 
  
 0.528
ADL05910.1
KEGG: cbt:CLH_0644 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
 
  
 0.503
ADL04487.1
PFAM: ABC-2 type transporter; KEGG: dhd:Dhaf_3151 ABC-2 type transporter.
 
  
 0.474
ADL03680.1
PFAM: ABC-2 type transporter; KEGG: dhd:Dhaf_3239 ABC-2 type transporter.
 
  
 0.472
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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