STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL04027.1Glycoside hydrolase family 18; KEGG: cpy:Cphy_1652 peptidoglycan-binding LysM; PFAM: glycoside hydrolase family 18; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; chitinase II. (428 aa)    
Predicted Functional Partners:
ADL04028.1
Manually curated; PFAM: cell wall hydrolase/autolysin; KEGG: cpy:Cphy_2818 cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin.
       0.561
ADL05137.1
Manually curated; KEGG: cbl:CLK_0651 hypothetical protein.
  
     0.516
ADL05780.1
PFAM: Sporulation stage III protein AB; KEGG: cpy:Cphy_2523 hypothetical protein.
  
     0.413
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.