STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL04345.1Phage portal protein, HK97 family; KEGG: spa:M6_Spy1140 portal protein; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein. (421 aa)    
Predicted Functional Partners:
ADL04348.1
TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: sak:SAK_0749 hypothetical protein.
 
   0.978
ADL04347.1
TIGRFAM: phage major capsid protein, HK97 family; KEGG: hmo:HM1_2880 phage major capsid protein, hk97 family.
 
 
 0.964
ADL04346.1
PFAM: peptidase S14 ClpP; KEGG: hmo:HM1_2881 peptidase S14, ClpP; Belongs to the peptidase S14 family.
 
  
 0.936
ADL04349.1
KEGG: det:DET1083 head-tail adaptor, putative.
 
 
 0.935
ADL05392.1
KEGG: dhd:Dhaf_2443 hypothetical protein.
 
    0.819
ADL05320.1
PFAM: ADP-ribosylation/Crystallin J1; KEGG: syp:SYNPCC7002_A0399 ADP-ribosylglycohydrolase.
   
 
 0.784
ADL03366.1
PFAM: Terminase; KEGG: drm:Dred_2607 phage terminase.
 
   
 0.781
ADL03377.1
KEGG: det:DET1078 TP901 family tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region.
 
     0.780
ADL03374.1
TIGRFAM: phage major tail protein, phi13 family; KEGG: det:DET1080 phi13 family major tail protein.
 
     0.778
ADL06078.1
KEGG: tex:Teth514_1236 hypothetical protein.
  
   
 0.762
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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