STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL04363.1KEGG: cpy:Cphy_1462 hypothetical protein. (92 aa)    
Predicted Functional Partners:
ADL04364.1
GTPase EngC; KEGG: cpy:Cphy_1463 GTPase EngC.
 
     0.593
ADL05937.1
KEGG: cdf:CD1883 AraC family transcription regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.521
ADL05786.1
PFAM: protein of unknown function DUF1062; KEGG: cac:CAC0055 hypothetical protein.
 
     0.434
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.