STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL04522.1PFAM: photosystem I assembly BtpA; KEGG: bmq:BMQ_1512 hypothetical protein. (272 aa)    
Predicted Functional Partners:
ADL04523.1
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cbt:CLH_1632 HAD-superfamily hydrolase, subfamily IA, variant 3.
       0.763
ADL04520.1
PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: str:Sterm_3024 phosphotransferase system PTS sorbose-specific IIC subunit.
 
     0.589
ADL04566.1
PFAM: PTS system Galactitol-specific IIC component; KEGG: str:Sterm_1734 PTS system galactitol-specific IIC component.
 
    0.544
ADL04521.1
PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: cbk:CLL_A3357 PTS system mannose/fructose/sorbose family IID component.
 
     0.533
ADL04519.1
PFAM: PTS system sorbose subfamily IIB component; KEGG: cdf:CD0492 PTS system, IIB component.
       0.428
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.