STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL04595.1KEGG: mbt:JTY_2200 hypothetical protein. (537 aa)    
Predicted Functional Partners:
ADL03053.1
PFAM: putative cell wall binding repeat-containing protein; KEGG: ccu:Ccur_08300 glycosyl hydrolase family 25.
 
  
 0.783
ADL03061.1
KEGG: bcg:BCG9842_B4210 collagen adhesion protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: Cna B domain protein.
  
     0.769
ADL03056.1
PFAM: Ig domain protein group 2 domain protein; KEGG: cce:Ccel_2338 hypothetical protein.
  
   
 0.768
ADL05164.1
PFAM: putative cell wall binding repeat-containing protein; Ig domain protein; KEGG: efa:EF2229 hypothetical protein.
  
   
 0.767
ADL06291.1
KEGG: drm:Dred_3043 hypothetical protein.
  
   
 0.766
ADL04266.1
KEGG: rca:Rcas_2446 hypothetical protein.
  
   
 0.759
ADL03170.1
PFAM: putative cell wall binding repeat-containing protein; KEGG: cpe:CPE0630 hypothetical protein.
 
  
 0.756
ADL03198.1
PFAM: putative cell wall binding repeat-containing protein; KEGG: shi:Shel_14460 glucan-binding domain-containing protein.
  
    0.752
ADL05163.1
PFAM: polysaccharide lyase 8 alpha-helical; metallophosphoesterase; polysaccharide lyase family 8; polysaccharide lyase family 8 domain protein; KEGG: pjd:Pjdr2_3195 hyaluronate lyase; SMART: LamG domain protein jellyroll fold domain protein.
 
    0.747
ADL03292.1
PFAM: putative cell wall binding repeat-containing protein; KEGG: shi:Shel_14460 glucan-binding domain-containing protein.
  
    0.743
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.