STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL04859.1Two component transcriptional regulator, AraC family; KEGG: cbe:Cbei_4464 response regulator receiver protein; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver. (408 aa)    
Predicted Functional Partners:
ADL04854.1
Multi-sensor signal transduction histidine kinase; KEGG: cbe:Cbei_4458 histidine kinase internal region; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; Cache domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein.
 
 
 0.924
ADL04949.1
KEGG: cbe:Cbei_4430 multi-sensor signal transduction histidine kinase; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; Cache domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein.
 
 
 0.860
ADL03541.1
Integral membrane sensor signal transduction histidine kinase; KEGG: cbe:Cbei_2898 histidine kinase internal region; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein.
 
 
 0.843
ADL04979.1
Integral membrane sensor signal transduction histidine kinase; KEGG: cpy:Cphy_3033 histidine kinase internal region; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein.
  
 
  0.833
ADL04668.1
Integral membrane sensor signal transduction histidine kinase; KEGG: bha:BH3447 two-component sensor histidine kinase; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein.
  
 
  0.828
ADL05864.1
Integral membrane sensor signal transduction histidine kinase; KEGG: cpy:Cphy_0495 histidine kinase internal region; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein.
 
 
 0.823
ADL04489.1
Signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; KEGG: cpy:Cphy_3281 signal transduction histidine kinase, LytS.
 
 
 0.820
ADL05096.1
Integral membrane sensor signal transduction histidine kinase; KEGG: clo:HMPREF0868_0288 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein.
 
 
 0.819
ADL04311.1
Integral membrane sensor signal transduction histidine kinase; KEGG: pjd:Pjdr2_0906 histidine kinase; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein.
  
 
  0.815
ADL02894.1
Integral membrane sensor signal transduction histidine kinase; KEGG: cce:Ccel_1227 histidine kinase; PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
  0.814
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.