STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL05089.1Delta-lactam-biosynthetic de-N-acetylase; KEGG: cpy:Cphy_1847 polysaccharide deacetylase; TIGRFAM: delta-lactam-biosynthetic de-N-acetylase; PFAM: polysaccharide deacetylase. (285 aa)    
Predicted Functional Partners:
ADL06337.1
PFAM: glycosyl transferase family 2; KEGG: cpy:Cphy_3103 glycosyl transferase family protein.
  
  
 0.647
ADL05088.1
KEGG: ere:EUBREC_2604 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; Belongs to the carbamate kinase family.
       0.532
ADL03204.1
PFAM: glycosyl transferase family 2; KEGG: eel:EUBELI_00095 hypothetical protein.
  
  
 0.429
ADL05086.1
PFAM: glycosyl transferase family 2; KEGG: ere:EUBREC_1030 glycosyltransferase.
  
  
 0.409
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.403
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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