STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL05288.1Two component transcriptional regulator, winged helix family; KEGG: ckr:CKR_3134 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver. (228 aa)    
Predicted Functional Partners:
ADL05289.1
Integral membrane sensor signal transduction histidine kinase; KEGG: ckr:CKR_3133 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
 
 
 0.960
ADL05292.1
PFAM: protein of unknown function DUF214; KEGG: cdl:CDR20291_0863 hypothetical protein.
 
   
 0.850
ADL02881.1
KEGG: cbt:CLH_2760 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein.
 
 
 0.839
ADL04737.1
Integral membrane sensor signal transduction histidine kinase; KEGG: shi:Shel_13150 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
 
 0.826
ADL05291.1
KEGG: ckr:CKR_3132 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
   
 0.819
ADL04728.1
KEGG: cpy:Cphy_2829 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
 
 0.791
ADL05697.1
Integral membrane sensor signal transduction histidine kinase; KEGG: dhd:Dhaf_1666 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
 
 0.789
ADL03457.1
KEGG: cpy:Cphy_1955 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
 
 0.768
ADL05110.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; metal dependent phophohydrolase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; Cache domain protein; PAS fold domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: amt:Amet_0967 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS domain containing protein; metal-dependent phosphohydrolase HD region.
  
 
 0.752
ADL06393.1
Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; histidine kinase HAMP region domain protein; Cache type 2 domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: amt:Amet_0967 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAS domain containing protein; histidine kinase HAMP region domain protein; metal-dependent phosphohydrolase HD region.
  
 
 0.752
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.