STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL05381.1KEGG: lmy:LM5923_1842 hypothetical protein. (269 aa)    
Predicted Functional Partners:
ADL05380.1
PFAM: type II secretion system protein E; KEGG: dsy:DSY0058 hypothetical protein.
 
     0.956
ADL05378.1
KEGG: lmy:LM5923_1839 hypothetical protein.
 
  
 0.954
ADL05379.1
KEGG: dsy:DSY0057 hypothetical protein.
 
  
 0.954
ADL05382.1
KEGG: dsy:DSY0060 hypothetical protein; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein.
 
    0.951
ADL05376.1
KEGG: dsy:DSY0054 hypothetical protein.
 
     0.945
ADL05377.1
KEGG: hmo:HM1_0591 hypothetical protein.
 
     0.945
ADL05384.1
PFAM: peptidase A24A prepilin type IV; KEGG: dsy:DSY0061 hypothetical protein.
 
   
 0.930
ADL05385.1
KEGG: lmy:LM5923_1845 hypothetical protein.
 
     0.926
ADL05982.1
KEGG: ere:EUBREC_1451 two-component response regulator involved in modulation of flagellar; PFAM: response regulator receiver; SMART: response regulator receiver.
  
 
 0.907
ADL05387.1
KEGG: lmy:LM5923_1847 hypothetical protein.
 
     0.900
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.