Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADL05737.1PFAM: glycoside hydrolase family 38; KEGG: gym:GYMC10_2685 glycoside hydrolase family 38. (691 aa)    
Predicted Functional Partners:
ADL05738.1
PHP domain protein; KEGG: gym:GYMC10_3545 phosphoesterase PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein.
 
     0.705
ADL05741.1
PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_2847 extracellular solute-binding protein family 1.
 
     0.689
ADL04266.1
KEGG: rca:Rcas_2446 hypothetical protein.
  
     0.621
ADL05163.1
PFAM: polysaccharide lyase 8 alpha-helical; metallophosphoesterase; polysaccharide lyase family 8; polysaccharide lyase family 8 domain protein; KEGG: pjd:Pjdr2_3195 hyaluronate lyase; SMART: LamG domain protein jellyroll fold domain protein.
 
     0.611
ADL05740.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gym:GYMC10_3547 binding-protein-dependent transport systems inner membrane component.
     
 0.610
ADL05739.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gym:GYMC10_3546 binding-protein-dependent transport systems inner membrane component.
     
 0.591
ADL03008.1
PFAM: oxidoreductase domain protein; KEGG: cpy:Cphy_2089 oxidoreductase domain-containing protein.
  
    0.589
ADL05164.1
PFAM: putative cell wall binding repeat-containing protein; Ig domain protein; KEGG: efa:EF2229 hypothetical protein.
  
     0.564
ADL04312.1
KEGG: pjd:Pjdr2_2546 two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver.
  
    0.550
ADL03892.1
Uroporphyrinogen-III decarboxylase-like protein; KEGG: smc:SmuNN2025_1096 hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.548
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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