STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL06014.1KEGG: pjd:Pjdr2_2517 collagen triple helix repeat protein; manually curated; PFAM: Collagen triple helix repeat. (383 aa)    
Predicted Functional Partners:
ADL06504.1
Hypothetical protein; KEGG: saq:Sare_1515 triple helix repeat-containing collagen.
  
   
 0.700
ADL03678.1
Hypothetical protein; KEGG: mmu:12832 collagen, type V, alpha 2.
  
     0.610
ADL03379.1
TIGRFAM: phage minor structural protein; KEGG: ere:EUBREC_1301 hypothetical protein.
  
   0.506
ADL03377.1
KEGG: det:DET1078 TP901 family tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region.
   
   0.493
ADL03580.1
KEGG: str:Sterm_2476 endothelin-converting enzyme 1; PFAM: peptidase M13; Peptidase M13, neprilysin-like.
  
    0.484
ADL06104.1
PFAM: glycosyl transferase family 2; KEGG: dae:Dtox_3123 hypothetical protein.
 
     0.469
ADL06015.1
PFAM: UvrD/REP helicase; KEGG: spx:SPG_1254 ATP-dependent DNA helicase.
   
   0.422
ADL04306.1
PFAM: Collagen triple helix repeat; KEGG: bld:BLi00801 hypothetical protein.
 
 
0.407
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.