STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL06408.1KEGG: eel:EUBELI_01332 6-phosphogluconolactonase. (351 aa)    
Predicted Functional Partners:
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
     
 0.730
ADL06298.1
KEGG: gym:GYMC10_0344 hypothetical protein.
  
    0.671
ADL03516.1
PFAM: aminodeoxychorismate lyase; KEGG: cpy:Cphy_2293 hypothetical protein.
 
     0.636
ADL06322.1
PFAM: Methyltransferase type 11; KEGG: cbe:Cbei_4749 methyltransferase type 12.
  
     0.620
ADL02778.1
KEGG: ere:EUBREC_0045 hypothetical protein.
  
     0.612
ADL04462.1
Putative transmembrane anti-sigma factor; KEGG: cpy:Cphy_2804 hypothetical protein.
  
     0.591
ADL02774.1
KEGG: eel:EUBELI_01987 hypothetical protein.
  
     0.583
ADL06735.1
PFAM: putative cell wall binding repeat-containing protein; KEGG: ccu:Ccur_08300 glycosyl hydrolase family 25.
  
    0.580
ADL03170.1
PFAM: putative cell wall binding repeat-containing protein; KEGG: cpe:CPE0630 hypothetical protein.
 
    0.527
ADL03849.1
KEGG: eel:EUBELI_01628 hypothetical protein.
  
     0.522
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.