STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL06456.1PFAM: regulatory protein TetR; KEGG: amt:Amet_0294 TetR family transcriptional regulator. (184 aa)    
Predicted Functional Partners:
ADL06455.1
PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: cbk:CLL_A1991 myosin-cross-reactive antigen.
 
     0.873
ADL02806.1
PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: cbt:CLH_2556 myosin-cross-reactive antigen.
 
     0.730
ADL05234.1
PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: smu:SMU.515 myosin-cross-reactive antigen.
 
     0.702
ADL03758.1
KEGG: cac:CAC3413 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
  
   
 0.565
ADL04420.1
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: bld:BLi02242 hypothetical protein.
  
     0.451
ADL04226.1
KEGG: cby:CLM_1172 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR.
  
   
 0.413
ADL04896.1
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: ckr:CKR_2131 hypothetical protein.
  
     0.411
ADL03946.1
SMART: helicase c2; Helicase-like, DEXD box c2 type; KEGG: ere:EUBREC_1516 putative ATP-dependent DNA-repair helicase.
  
     0.408
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.